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Our nutrigenomics publications
- Barnett MPG, Zhu ZT, Cookson AL, Broadhurst R, Knoch B, Davy M, McNabb WC, Roy NC (2007). Effect of inoculation with intestinal bacteria on intestinal gene expression in the interleukin-10 knockout mouse. Energy and Protein Metabolism 124: 297-298.
- Browning BL (2006). FLOSS: Flexible ordered subset analysis for linkage mapping of complex traits. Bioinformatics 22 (4):512-513.
- Browning BL (2006). DLG5 variants and susceptibility to inflammatory bowel disease in the Scottish population. Gut 55(7):1050-1050.
- Browning BL, Annese V, Barclay ML, Bingham SA, Brand S, Büning C, Castro M, Cucchiara S, Dallapiccola B, Drummond H, Ferguson LR, Ferraris A, Fisher SA, Gearry RB, Glas J, Henckaerts L, Huebner C, Knafelz D, Lakatos L, Lakatos PL, Latiano A, Liu X, Mathew C, Müller-Myhsok B, Newman WG, Nimmo ER, Noble CL, Palmieri O, Parkes M, Petermann I, Rutgeerts P, Satsangi J, Shelling AN, Siminovitch KA, Török HP, Tremelling M, Vermeire S, Valvano MR, Witt H 2008. Gender-stratified analysis of DLG5 R30Q in 4707 Crohn’s disease patients and 4973 controls from 12 Caucasian cohorts. Journal of Medical Genetics 45(1):36-42.
- Browning BL, Browning SR. (2007). Efficient multilocus association testing for whole genome association studies using localized haplotype clustering. Genetics and Epidemiology 31(5):365-75.
- Browning BL, Browning SR. (2008). Haplotypic analysis of Wellcome Trust Case Control Consortium data. Human Genetics 123(3):273-80.
- Browning BL, Huebner C, Petermann I, Demmers P, McCulloch A, Gearry R, Barclay M, Shelling AN, Ferguson LR (2007). Association of DLG5 variants with inflammatory bowel disease in the New Zealand Caucasian population and metaanalysis of the DLG5 R30Q variant. Inflammatory Bowel Diseases 13(9):1069-76.
- Browning BL, Huebner C, Petermann I, Gearry R, Barclay M, Shelling AN, Ferguson LR. (2007). Has toll-like receptor 4 been prematurely rejected as an inflammatory bowel disease gene? Association study combined with meta-analysis shows strong evidence for association. American Journal of Gastroenterology 102(11):2504-12.
- Browning SR, Browning BL. (2007). Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering. American Journal of Human Genetics 81(5):1084-97.
- Comeskey DJ, Cooney JM, Rowan DD. (2006). Synthesis of deuterated dihydrochalcones. Journal of Labelled Compounds and Radiopharmaceuticals 49(6):479-487.
- Dommels YEM, Butts CA, Zhu S, Davy M, Martell S, Hedderley D, Barnett MPG, McNabb WC, Roy NC (2007). Characterization of intestinal inflammation and identification of related gene expression changes in mdr1a-/- mice. Genes & Nutrition 2(2):209-223.
- Dryland PA, Love DR, Walker MF, Dommels Y, Butts C, Rowan D, Roy NC, Helsby N, Brian L. Browning BL, Zhu S, Copp BR, Ferguson LR (2008). Allantoin as a biomarker of inflammation in an Inflammatory Bowel Disease mouse model: NMR analysis of urine. The Open Bioactive Compounds Journal, accepted.
- Ferguson L (2006). Nutrigenomics: integrating genomic approaches into nutrition research. Molecular Diagnosis and Therapy 10(2):101-108.
- Ferguson LR (2006). Nutrigenomics and clinical nutrition. Complete Nutrition 6, 13-15.
- Ferguson LR (2008). Nutrigenomics approaches to functional foods: reducing or enhancing the complexity? American Journal of Dietetics (accepted).
- Ferguson LR (2008). Dissecting the nutrigenomics, diabetes and gastrointestinal disease interface: From risk assessment to health intervention. OMICS Journal of Integrative Biology: Special Theme Issue on Nutrigenomics (accepted).
- Ferguson LR, Browning BL, Huebner C, Petermann I, Shelling AN, Demmers P, McCulloch A, Gearry RB, Barclay ML, Philpott M (2008). Single nucleotide polymorphisms in human Paneth cell defensin A5 may confer susceptibility to inflammatory bowel disease in a New Zealand Caucasian population. Digestive and Liver Disease 2008 Apr 2 [Epub ahead of print doi:10.1016/j.dld.2008.02.011].
- Ferguson LR, Huebner C, Petermann I, Gearry RB, Barclay ML, Demmers P, McCulloch A, Han DY (2008). Single nucleotide polymorphisms in the promoter of the Tumor necrosis factor-alpha gene affect the risks of developing Inflammatory Bowel Diseases: New Zealand data and a meta-analysis. World Journal of Gastroenterology (accepted).
- Ferguson LR, Petermann I, Huebner C, Philpott M, Shelling AN (2007). Uncoupling gene-diet interactions in inflammatory bowel disease, Genes & Nutrition 2(1):71-73.
- Ferguson L, Philpott M. (2005). New Zealand - fertile ground for functional foods and nutrigenomics. Current Topics in Nutraceutical Research 3, 199-204.
- Ferguson LR, Philpott M. (2007). Cancer prevention by dietary bioactive components that target the immune response. Current Cancer Drug Targets 7(5):459-64.
- Ferguson LR, Philpott M, Dryland P (2007). Nutrigenomics in the whole-genome scanning era: Crohn’s Disease as example. Cellular and Molecular Life Sciences 64(23):3105-18.
- Ferguson LR Shelling AN, Browning BL, Huebner C, Petermann I (2007). Genes, diet and inflammatory bowel disease, Mutation Research: Fundamental Molecular Mechanisms and Mutagenesis 622(1-2):70-83.
- Ferguson LR, Shelling AN, Lauren D, Heyes JA, McNabb W (2007). Nutrigenomics and gut health. Mutation Research: Fundamental Molecular Mechanisms and Mutagenesis 622(1-2):1-6.
- Ferguson LR, Shelling AN, Lauren D, McNabb WC (2007). Nutrigenomics and gut health: meeting report from an international conference in Auckland , New Zealand , April 30, May 1–3, 2006. Genes & Nutrition 2(1):157-160.
- Ghosh D, Skinner M, Ferguson LR (2006). The role of the Therapeutic Goods Administration and the Medicine and Medical Devices Safety Authority in evaluating complementary and alternative medicines in Australia and New Zealand . Toxicology 221(1):88-94.
- Ghosh D, Skinner MA, Laing WA (2007). Pharmacogenomics and nutrigenomics: synergies and differences. European Journal of Clinical Nutrition 61(5):567-74.
- Huebner C, Petermann I, Browning BL, Shelling AN, Ferguson LR (2007). Triallelic SNPs and genotyping error in genetic epidemiology studies - MDR1 (ABCB1) G2677/T/A as an example. Cancer Epidemiology, Biomarkers & Prevention 16(6):1185–92.
- Kaput J, Ordovas JM, Ferguson L, van Ommen B, Rodriguez RL, Allen L, Ames BN, Dawson K, German B, Krauss R, Malyj W, Archer MC, Barnes S, Bartholomew A, Birk R, van Bladeren P, Bradford KJ, Brown K, Caetano R, Castle D, Chadwick R, Clarke S, Clément K, Corella D, Manica da Cruz IB, Daniel H, Duster T, Ebbesson SOE, Elliott R, Fairweather-Tait S, Felton J, Fenech M, Finley JW, Fogg-Johnson N, Gill-Garrison R, Gibney MJ, Gillies PJ, Gustafsson J-A, Hartman JL, He L, Hwang J-K, Jang Y, Joost H, Junien C, Kanter M, Kibbe WA, Koletzko B, Korf BR, Kornman K, Krempin DW, Langin D, Lauren DR, Lee JH, Leveille GA, Lin S-J, Mathers J, Mayne M, McNabb W, Milner JA, Morgan P, Muller M, Nikolsky Y, van der Ouderaa R, Park T, Pensel N, Perez-Jimenez F, Philippe J, Poutanen K, Roberts M, Saris W, Schuster G, Shelling AN, Simopoulos AP, Southon S, Tai ES, Towne B, Trayhurn P, Uauy R, Visek WJ, Warden C, Weiss R, Wiencke J, Winkler J, L. Wolff GL, Zhao- Wilson X, Zucker J-D (2005). The case for strategic international alliances to harness nutritional genomics for public and personal health. British Journal of Nutrition 94, 623-632.
- Knoch B, Barnett MPG, McNabb WC, Dommels YEM, Zhu ZT, Knowles SO, Roy NC (2007). Dietary polyunsaturated fatty acids reduced expression of colonic inflammatory genes in interleukin-10 knockout mice. Energy and Protein Metabolism 124: 279-280.
- Knoch B, Barnett MPG, Zhu ST, Park ZA, Nones K, Dommels YEM, Knowles S, McNabb WC & Roy NC (2008). Genome-wide analysis of dietary eicosapentaenoic acid- and oleic acid-induced modulation in colon inflammation of interleukin 10 gene deficient mice. Journal of Nutrigenetics and Nutrigenomics D0I10.1159/000134292 (in press).
- Love DR, Lan CC, Dodd A, Shelling AN, McNabb WC, Ferguson LR. (2007). Modelling inflammatory bowel disease: the zebrafish as a way forward. Expert Review Molecular Diagnostics 7(2):177-93.
- Nones K, Dommels Y, Butts C, Zhu S, Park-Ng Z, Hedderley D, Barnett MPG, McNabb WC, Roy NC (2007). Dietary curcumin and rutin altered colonic inflammation and gene expression of mdr1a-/- mice, a model for Inflammatory Bowel Disease. Manuscript accepted in British Journal of Nutrition.
- Philpott M, Mackay L, Ferguson LR, Forbes D, Skinner M (2007). Cell culture models in developing nutrigenomics foods for inflammatory bowel disease. Mutation Research: Fundamental Molecular Mechanisms and Mutagenesis 622(1- 2): 94-102.
- Roy NC, Barnett MPG, Knoch B, Dommels Y, McNabb WC (2007). Nutrigenomics applied to an animal model of Inflammatory Bowel Diseases: transcriptomic analysis of the effects of eicosapentaenoic acid- and arachidonic acid-enriched diets. Mutation Research: Fundamental Molecular Mechanisms and Mutagenesis 622(1-2):103-16.
- Roy NC, Barnett MPG, McNabb WC (2007). Nutrigenomics New Zealand – tailoring New Zealand foods to match people’s genes; a case study. Energy and Protein Metabolism 124:315-316.
- Shelling AN, Ferguson LR (2007). Genetic variation in human disease, and a new role for copy number variants. Mutation Research: Fundamental Molecular Mechanisms and Mutagenesis 622(1-2):33-41.
- Sutherland J, Miles M, Hedderley D, Li J, Devoy S, Sutton K & Lauren D (2008). In vitro effects of food components on selected probiotic and pathogenic bacteria. Accepted for publication in International Journal of Food Sciences and Nutrition.
- Sutton K (2007). Considerations for the successful development and launch of personalised nutrigenomic foods. Mutation Research: Fundamental Molecular Mechanisms and Mutagenesis 622(1-2):117-121.
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